@article{bib1,
	author = {Battle, A and Brown, CD and Engelhardt, BE and Montgomery, SB},
	journal = {Nature},
	year = {2017},
	pages = {204--213},
	title = {Genetic effects on gene expression across human tissues},
	volume = {550},
}

@article{bib2,
	author = {Chella Krishnan, K and Vergnes, L and Ac{\' i}n-P{\' e}rez, R and Stiles, L and Shum, M and Ma, L and Mouisel, E and Pan, C and Moore, TM and P{\' e}terfy, M and Romanoski, CE and Reue, K and Bj{\" o}rkegren, JLM and Laakso, M and Liesa, M and Lusis, AJ},
	journal = {Nature Metabolism},
	year = {2021},
	pages = {1552--1568},
	title = {Sex-specific genetic regulation of adipose mitochondria and metabolic syndrome by {Ndufv2}},
	volume = {3},
}

@article{bib3,
	author = {Clegg, DJ and Mauvais-Jarvis, F},
	journal = {Molecular Metabolism},
	year = {2018},
	pages = {1--2},
	title = {An integrated view of sex differences in metabolic physiology and disease},
	volume = {15},
}

@article{bib4,
	author = {Danziger, SA and Gibbs, DL and Shmulevich, I and McConnell, M and Trotter, MWB and Schmitz, F and Reiss, DJ and Ratushny, AV},
	journal = {PLOS ONE},
	year = {2019},
	title = {ADAPTS: Automated deconvolution augmentation of profiles for tissue specific cells},
	volume = {14},
}

@article{bib5,
	author = {Eckel, J},
	journal = {Diabetologia},
	year = {2019},
	pages = {1523--1528},
	title = {Myokines in metabolic homeostasis and diabetes},
	volume = {62},
}

@article{bib6,
	author = {Febbraio, MA and Pedersen, BK},
	journal = {Nature Reviews. Endocrinology},
	year = {2020},
	pages = {619--620},
	title = {Who would have thought - myokines two decades on},
	volume = {16},
}

@article{bib7,
	author = {Haizlip, KM and Harrison, BC and Leinwand, LA},
	journal = {Physiology (Bethesda, Md.)},
	year = {2015},
	pages = {30--39},
	title = {Sex-based differences in skeletal muscle kinetics and fiber-type composition},
	volume = {30},
}

@article{bib8,
	author = {Kim, S and Choi, J-Y and Moon, S and Park, D-H and Kwak, H-B and Kang, J-H},
	journal = {Pflugers Archiv},
	year = {2019},
	pages = {491--505},
	title = {Roles of myokines in exercise-induced improvement of neuropsychiatric function},
	volume = {471},
}

@article{bib9,
	author = {Kim, JS and Galv{\~ a}o, DA and Newton, RU and Gray, E and Taaffe, DR},
	journal = {Nature Reviews. Urology},
	year = {2021},
	pages = {519--542},
	title = {Exercise-induced myokines and their effect on prostate cancer},
	volume = {18},
}

@article{bib10,
	author = {Kollias, HD and McDermott, JC},
	journal = {Journal of Applied Physiology (Bethesda, Md},
	year = {2008},
	pages = {579--587},
	title = {Transforming growth factor-beta and myostatin signaling in skeletal muscle},
	volume = {104},
}

@article{bib11,
	author = {Kuleshov, MV and Jones, MR and Rouillard, AD and Fernandez, NF and Duan, Q and Wang, Z and Koplev, S and Jenkins, SL and Jagodnik, KM and Lachmann, A and McDermott, MG and Monteiro, CD and Gundersen, GW and Ma\textquoteright{}ayan, A},
	journal = {Nucleic Acids Research},
	year = {2016},
	title = {Enrichr: a comprehensive gene set enrichment analysis web server 2016 update},
	volume = {44},
}

@article{bib12,
	author = {Langfelder, P and Horvath, S},
	journal = {BMC Bioinformatics},
	year = {2008},
	title = {WGCNA: an {R} package for weighted correlation network analysis},
	volume = {9},
}

@article{bib13,
	author = {Li, H and Auwerx, J},
	journal = {Trends in Genetics},
	year = {2020},
	pages = {259--272},
	title = {Mouse {Systems} {Genetics} as a {Prelude} to {Precision} {Medicine}},
	volume = {36},
}

@article{bib14,
	author = {Liao, Y and Smyth, GK and Shi, W},
	journal = {Nucleic Acids Research},
	year = {2019},
	title = {The {R} package {Rsubread} is easier, faster, cheaper and better for alignment and quantification of {RNA} sequencing reads},
	volume = {47},
}

@article{bib15,
	author = {Liao, Y and Wang, J and Jaehnig, EJ and Shi, Z and Zhang, B},
	journal = {Nucleic Acids Research},
	year = {2019},
	title = {WebGestalt 2019: gene set analysis toolkit with revamped {UIs} and {APIs}},
	volume = {47},
}

@article{bib16,
	author = {Love, MI and Huber, W and Anders, S},
	journal = {Genome Biology},
	year = {2014},
	title = {Moderated estimation of fold change and dispersion for {RNA}-seq data with {DESeq2}},
	volume = {15},
}

@article{bib17,
	author = {Mauvais-Jarvis, F},
	journal = {Biology of Sex Differences},
	year = {2015},
	title = {Sex differences in metabolic homeostasis, diabetes, and obesity},
	volume = {6},
}

@article{bib18,
	author = {Mauvais-Jarvis, F and Arnold, AP and Reue, K},
	journal = {Cell Metabolism},
	year = {2017},
	pages = {1216--1230},
	title = {A {Guide} for the {Design} of {Pre}-clinical {Studies} on {Sex} {Differences} in {Metabolism}},
	volume = {25},
}

@article{bib19,
	author = {McMahon, CD and Popovic, L and Jeanplong, F and Oldham, JM and Kirk, SP and Osepchook, CC and Wong, KWY and Sharma, M and Kambadur, R and Bass, JJ},
	journal = {American Journal of Physiology. Endocrinology and Metabolism},
	year = {2003},
	title = {Sexual dimorphism is associated with decreased expression of processed myostatin in males},
	volume = {284},
}

@article{bib20,
	author = {Norheim, F and Hasin-Brumshtein, Y and Vergnes, L and Chella Krishnan, K and Pan, C and Seldin, MM and Hui, ST and Mehrabian, M and Zhou, Z and Gupta, S and Parks, BW and Walch, A and Reue, K and Hofmann, SM and Arnold, AP and Lusis, AJ},
	journal = {Cell Metabolism},
	year = {2019},
	pages = {932--949},
	title = {Gene-by-{Sex} {Interactions} in {Mitochondrial} {Functions} and {Cardio}-{Metabolic} {Traits}},
	volume = {29},
}

@article{bib21,
	author = {Reisz-Porszasz, S and Bhasin, S and Artaza, JN and Shen, R and Sinha-Hikim, I and Hogue, A and Fielder, TJ and Gonzalez-Cadavid, NF},
	journal = {American Journal of Physiology. Endocrinology and Metabolism},
	year = {2003},
	title = {Lower skeletal muscle mass in male transgenic mice with muscle-specific overexpression of myostatin},
	volume = {285},
}

@article{bib22,
	author = {Ribas, V and Drew, BG and Zhou, Z and Phun, J and Kalajian, NY and Soleymani, T and Daraei, P and Widjaja, K and Wanagat, J and de Aguiar Vallim, TQ and Fluitt, AH and Bensinger, S and Le, T and Radu, C and Whitelegge, JP and Beaven, SW and Tontonoz, P and Lusis, AJ and Parks, BW and Vergnes, L and Reue, K and Singh, H and Bopassa, JC and Toro, L and Stefani, E and Watt, MJ and Schenk, S and Akerstrom, T and Kelly, M and Pedersen, BK and Hewitt, SC and Korach, KS and Hevener, AL},
	journal = {Science Translational Medicine},
	year = {2016},
	title = {Skeletal muscle action of estrogen receptor \alpha{} is critical for the maintenance of mitochondrial function and metabolic homeostasis in females},
	volume = {8},
}

@article{bib23,
	author = {Rubenstein, AB and Smith, GR and Raue, U and Begue, G and Minchev, K and Ruf-Zamojski, F and Nair, VD and Wang, X and Zhou, L and Zaslavsky, E and Trappe, TA and Trappe, S and Sealfon, SC},
	journal = {Scientific Reports},
	year = {2020},
	title = {Single-cell transcriptional profiles in human skeletal muscle},
	volume = {10},
}

@article{bib24,
	author = {Seldin, MM and Wong, GW},
	journal = {Adipocyte},
	year = {2012},
	pages = {200--202},
	title = {Regulation of tissue crosstalk by skeletal muscle-derived myonectin and other myokines},
	volume = {1},
}

@article{bib25,
	author = {Seldin, MM and Koplev, S and Rajbhandari, P and Vergnes, L and Rosenberg, GM and Meng, Y and Pan, C and Phuong, TMN and Gharakhanian, R and Che, N and M{\" a}kinen, S and Shih, DM and Civelek, M and Parks, BW and Kim, ED and Norheim, F and Chella Krishnan, K and Hasin-Brumshtein, Y and Mehrabian, M and Laakso, M and Drevon, CA and Koistinen, HA and Tontonoz, P and Reue, K and Cantor, RM and Bj{\" o}rkegren, JLM and Lusis, AJ},
	journal = {Cell Metabolism},
	year = {2018},
	pages = {1138--1155},
	title = {A {Strategy} for {Discovery} of {Endocrine} {Interactions} with {Application} to {Whole}-{Body} {Metabolism}},
	volume = {27},
}

@article{bib26,
	author = {Seldin, MM and Lusis, AJ},
	journal = {Journal of Lipid Research},
	year = {2019},
	pages = {450--455},
	title = {Systems-based approaches for investigation of inter-tissue communication},
	volume = {60},
}

@article{bib27,
	author = {Seldin, M and Yang, X and Lusis, AJ},
	journal = {Nature Metabolism},
	year = {2019},
	pages = {1038--1050},
	title = {Systems genetics applications in metabolism research},
	volume = {1},
}

@article{bib28,
	author = {Severinsen, MCK and Pedersen, BK},
	journal = {Endocrine Reviews},
	year = {2020},
	pages = {594--609},
	title = {Muscle-{Organ} {Crosstalk}: The {Emerging} {Roles} of {Myokines}},
	volume = {41},
}

@article{bib29,
	author = {{The Alliance of Genome Resources Consortium}},
	journal = {Nucleic Acids Research},
	year = {2020},
	title = {Alliance of {Genome} {Resources} {Portal}: unified model organism research platform},
	volume = {48},
}

@article{bib30,
	author = {{The UniProt Consortium}},
	journal = {Nucleic Acids Research},
	year = {2021},
	title = {UniProt: the universal protein knowledgebase in 2021},
	volume = {49},
}

@article{bib31,
	author = {Velez, LM and Seldin, MM},
	year = {2022},
	title = {myokine-signaling},
	howpublished = {https://archive.softwareheritage.org/swh:1:dir:f85e39fc6a9e5925b66376dc77f748cfc76489b2;origin=https://github.com/Leandromvelez/myokine-signaling;visit=swh:1:snp:2a361a2495b23946ffe3e2d9eb10c9db3e371db2;anchor=swh:1:rev:530dc39df1c586ad67eab36688fa2c1936b06354},
}

@article{bib32,
	author = {Wu, T and Hu, E and Xu, S and Chen, M and Guo, P and Dai, Z and Feng, T and Zhou, L and Tang, W and Zhan, L and Fu, X and Liu, S and Bo, X and Yu, G},
	journal = {Innovation (New York, N.Y.)},
	year = {2021},
	title = {clusterProfiler 4.0: A universal enrichment tool for interpreting omics data},
	volume = {2},
}

@article{bib33,
	author = {Yokota, T and McCourt, J and Ma, F and Ren, S and Li, S and Kim, T-H and Kurmangaliyev, YZ and Nasiri, R and Ahadian, S and Nguyen, T and Tan, XHM and Zhou, Y and Wu, R and Rodriguez, A and Cohn, W and Wang, Y and Whitelegge, J and Ryazantsev, S and Khademhosseini, A and Teitell, MA and Chiou, P-Y and Birk, DE and Rowat, AC and Crosbie, RH and Pellegrini, M and Seldin, M and Lusis, AJ and Deb, A},
	journal = {Cell},
	year = {2020},
	pages = {545--562},
	title = {Type {V} {Collagen} in {Scar} {Tissue} {Regulates} the {Size} of {Scar} after {Heart} {Injury}},
	volume = {182},
}

@article{bib34,
	author = {Zore, T and Palafox, M and Reue, K},
	journal = {Molecular Metabolism},
	year = {2018},
	pages = {35--44},
	title = {Sex differences in obesity, lipid metabolism, and inflammation-{A} role for the sex chromosomes?},
	volume = {15},
}

