FROM stencila/executa-midi:20220302.1 USER root RUN Rscript -e 'install.packages(c("BiocManager","colormap","pheatmap","emmeans","rstatix","reticulate","Seurat","mclust"))' RUN Rscript -e 'BiocManager::install(c("WGCNA","DESeq2","limma","preprocessCore","DeconRNASeq"))' # DeconRNASeq required for ADAPTS RUN Rscript -e 'install.packages("ADAPTS")' USER guest