Stochastic logistic models reproduce experimental time series of microbial communities

Snapshot #4

Download Open
nokome 3 years, 5 months ago Finished

Preview

A preview of how your snapshot will appear to readers.

Image

The fully qualified identifier of the container image used to generate this snapshot.

docker.io/stencila/executa-midi@sha256:03f88123e34359e23a3a9763aa66702bb7ac3118a2b5356d852c6928f863d81b

Files

The files archived in this snapshot.

Type Path Last modified Size Actions
55650v1 3 years, 5 months ago 138.8KiB
55650v1.ipynb 3 years, 5 months ago 134.5KiB
Data 3 years, 5 months ago 168.7MiB
Experimental.ipynb 3 years, 5 months ago 280.9KiB
Figures eLife.ipynb 3 years, 5 months ago 322.3KiB
Fisher Mehta neutral model annotated.ipynb 3 years, 5 months ago 108.5KiB
Influence interactions SOI and sgLV.ipynb 3 years, 5 months ago 2.1MiB
Noise color fit comparison (linear vs spline).ipynb 3 years, 5 months ago 50.0KiB
README 3 years, 5 months ago 1.1KiB
Study noise no interaction.ipynb 3 years, 5 months ago 1.5MiB
Study noise with interaction.ipynb 3 years, 5 months ago 1.3MiB
Understand noise color.ipynb 3 years, 5 months ago 60.6KiB
Understanding Fisher Mehta Figure 2B.ipynb 3 years, 5 months ago 2.0MiB
Width distribution dx.ipynb 3 years, 5 months ago 184.7KiB
article.ipynb.media 3 years, 5 months ago 300.6KiB
article.xml 3 years, 5 months ago 135.8KiB
article.xml.media 3 years, 5 months ago 300.6KiB
brownian.py 3 years, 5 months ago 2.6KiB
elife_settings.py 3 years, 5 months ago 1.1KiB
generate_timeseries.py 3 years, 5 months ago 15.2KiB
index.html 3 years, 5 months ago 400.5KiB
index.html.media 3 years, 5 months ago 300.6KiB
make_colormap.py 3 years, 5 months ago 1.8KiB
neutral_covariance_test.py 3 years, 5 months ago 5.1KiB
neutrality_analysis.py 3 years, 5 months ago 4.0KiB
noise_analysis.py 3 years, 5 months ago 26.9KiB
noise_color_analysis.py 3 years, 5 months ago 2.7KiB
noise_parameters.py 3 years, 5 months ago 409.0B
noise_properties_plotting.py 3 years, 5 months ago 22.8KiB
results 3 years, 5 months ago 669.2MiB
smooth_spline.py 3 years, 5 months ago 4.6KiB
timeseries_plotting.py 3 years, 5 months ago 1.0KiB